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samtools through 1.24 fixed in 1.25 and backports

Original title: Multiple vulnerabilities in samtools <= 1.24

oss-security ()1
Part of a story covered by 2 sourcesHTSlib and samtools through 1.24 patched; CVE IDs pendingMerged summary & timeline
AI summary · x-ai/grok-4.7Summaries by Vani AI

Fixes were also back-ported to 1.24.1, 1.23.3, 1.22.4 and 1.21.3; CVE numbers are not assigned yet.

Robert Davies reported multiple vulnerabilities in the samtools package through version 1.24 on the oss-security list on October 27. All of the issues are fixed in release 1.25 and back-ported to 1.24.1, 1.23.3, 1.22.4 and 1.21.3. CVE identifiers are pending because GitHub, the assigning authority, has a backlog; the post points to GitHub pages that will be updated when IDs are issued. The feed snippet does not describe the individual flaws.

Unconfirmed: The snippet does not name the individual vulnerabilities, their impact, or whether they are exploited.

Key facts
  • Posted by Robert Davies on October 27.
  • Affected range stated as samtools <= 1.24.
  • Fixed in 1.25, 1.24.1, 1.23.3, 1.22.4 and 1.21.3.
  • No CVE numbers yet because of a GitHub assignment backlog.
Security assessment · AI, from the article

Impact: Multiple unspecified flaws in samtools

ProductAffectedFixed in
samtools<= 1.241.25, 1.24.1, 1.23.3, 1.22.4, 1.21.3
What to do
  1. 1.Upgrade samtools to 1.25 or the listed back-ports 1.24.1, 1.23.3, 1.22.4 or 1.21.3.
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From the original article

Posted by Robert Davies on Oct 27 Multiple vulnerabilities, listed below, have been disclosed in the samtools package. These have all been fixed in a new release 1. 25 and have also been pack-ported to versions 1.

A short excerpt; the article and its images belong to the publisher. Summary, key facts and assessment above are AI-written from the article and can be wrong.