Search: “graph-transformer”

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Disentangling Representation Evolution in Transformers through Directional Decomposition

Researchers decompose transformer updates into parallel and perpendicular components, linking representation geometry to editing robustness, compression diagnosis, and training interventions.

The paper studies transformer representation evolution as functional geometry, decomposing learned updates into parallel and perpendicular components across attention/MLP and value-aggregation spaces. Targeted edits reveal a space-dependent asymmetry: exclude-self value-space parallel manipulation is markedly more robust than residual-space and perpendicular counterparts. Full-aggregate parallel suppression during from-scratch pretraining lowers validation-loss trajectories and improves downstream averages, with the value-space variant strongest. Code is released on GitHub.

Hugging Face daily papers·updated Sep 14, 17:56 UTC · 2d ago·first Sep 13, 20:00 UTC · 2d agoAI research 2 sources

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Graph Machine: Towards Better Pretraining via Edges

Researchers propose Graph Machine, an O(n)-state sparse architecture that replaces 75% of Qwen3-0.6B dense layers with only slight loss change.

The paper introduces the Graph Machine (GM), an architecture that maintains an O(n)-sized state accessed through sparse, dynamic routing via pointer-like edges updated differentiably by a referral mechanism resembling pointer chasing. The authors replaced 75% of dense Transformer layers in Qwen3-0.6B with GM sparse layers and pretrained from scratch on 15.7B tokens. Retrieving 2 of 4,096 tokens per KV head in each sparse layer degrades loss only slightly, while retrieving 4 marginally improves loss over the dense baseline.

Hugging Face daily papers·Sep 1, 20:00 UTC · 14d agoAI research

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Embedded Graph Flows for Categorical Graph Generation

Researchers propose Embedded Graph Flows, a generative model with learned categorical embeddings that beats DiGress and GruM on molecular graph benchmarks.

Embedded Graph Flows (EGF) learns continuous embeddings for node and unordered-edge categories and transports Gaussian noise toward these endpoints using a permutation-equivariant graph transformer. On QM9 it achieves the best result on all four reported metrics, with a Fréchet ChemNet Distance of 0.150 versus 0.717 for DiGress and 0.812 for GruM. On ZINC250k it retains the lowest NSPDK MMD, indicating close agreement with local substructures of reference molecules. Code is released on GitHub.

arXiv cs.AI / cs.LG / cs.CL·Sep 4, 16:26 UTC · 12d agoAI research1

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Distance generalization in transformers: why bother with positional encoding?

arXiv study uses synthetic delay-copy tasks to show how RoPE, ALiBi, NoPE and training data diversity affect transformers' distance generalization.

The paper studies distance generalization in transformers: extrapolating when inter-token distances change between training and inference while context length stays fixed. Using two synthetic delay-copy tasks with finite source-recall distances, the authors test models on unseen delays. They investigate whether positional encodings such as RoPE and ALiBi outperform no positional encoding (NoPE), how the diversity of training distances affects performance, and when distance transfer learning is positive or negative.

arXiv cs.AI / cs.LG / cs.CL·Sep 10, 17:57 UTC · 6d agoAI research2

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UniMate: One Unified Model to Animate Diverse Skeletons

UniMate is a topology-aware diffusion transformer generating articulated motion for arbitrary rigged skeletons from text, trained on 13,006 motion sequences.

UniMate is a unified foundation model that animates arbitrary rigged 3D skeletons from an asset and text prompt with no test-time optimization or per-skeleton retraining. It uses a topology-aware diffusion transformer combining graph-aware attention bias from joint relations and geodesic distances, a spectral rotary position embedding generalizing RoPE to kinematic trees via the graph Laplacian, and a global topological conditioner. The accompanying UniML3D dataset spans 13,006 motion sequences across bipedal, quadrupedal, avian, marine, insectoid, serpentine, and articulated rigid-object skeletons; the model outperforms baselines and supports zero-shot cross-topology transfer, in-betweening, expansion, and text-guided editing.

Hugging Face daily papers·Sep 3, 20:00 UTC · 12d agoAI research

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Learning Sparse Decision Trees via Transformer Variational Auto-Encoders

TREVIS uses a Tree Transformer VAE latent space to learn decision trees matching near-optimal predictive performance while improving structural sparsity.

TREVIS learns decision trees optimized for complex objectives by exploring the latent space of a Tree Transformer Variational Auto-Encoder (TTVAE). Mapping trees to continuous latent representations replaces the discrete search space with a continuous one, enabling gradient-based optimization through a differentiable surrogate model. Experiments show TREVIS matches the predictive performance of near-optimal algorithms while improving structural sparsity, targeting high-stakes contexts needing transparent decision logic.

Hugging Face daily papers·Aug 31, 20:00 UTC · 15d agoAI research

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UniMate: One Unified Model to Animate Diverse Skeletons

Researchers introduce UniMate, a topology-aware diffusion transformer generating text-driven motion for arbitrary 3D skeletons without per-skeleton retraining.

UniMate is a unified foundation model that synthesizes articulated motion for arbitrary skeletons from a rigged 3D asset and a text prompt, with no test-time optimization or per-skeleton fine-tuning. It uses a topology-aware diffusion transformer combining graph-aware attention bias, a spectral rotary position embedding generalizing RoPE via the graph Laplacian, and a rest-pose topological conditioner. Trained on UniML3D, a curated set of 13,006 motion sequences spanning bipedal to serpentine skeletons, it outperforms state-of-the-art baselines and supports zero-shot cross-topology transfer, in-betweening, and text-guided editing.

arXiv cs.AI / cs.LG / cs.CL·Sep 4, 17:59 UTC · 12d agoAI research

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RelightFormer: Feed-forward Generative Transformer for Multiview Object Relighting

RelightFormer is a feed-forward generative transformer for photorealistic single- and multi-view object relighting, trained on a 90K-object dataset.

Researchers introduce RelightFormer, a feed-forward generative transformer adapted from a video foundation model that performs direct image relighting without explicit intrinsic property estimation. The architecture injects target environment maps via a latent illumination module with cross-attention and uses permutation-invariant positional encodings for unordered multi-view inputs. Training relies on the newly constructed Laval Objaverse Dataset (LOD) with 90K objects and 39K unique illuminations, and the model shows state-of-the-art quality with strong zero-shot generalization across single-view, multi-view, and novel-view relighting.

Hugging Face daily papers·Sep 6, 20:00 UTC · 9d agoAI research

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RenderFormer-V2: Neural Rendering with Heterogeneous Scene Primitives

RenderFormer-V2 is a transformer-based neural renderer handling caustics, volumetric scattering and out-of-distribution materials without per-scene training or specialized code.

RenderFormer-V2 is a learned transformer-based neural rendering model that models global light transport as a sequence-to-sequence transformation, handling caustics, volumetric scattering, environment lighting, textured and displaced surfaces and out-of-distribution materials. It uses a two-stage process: a view-independent stage resolving primitive-to-primitive transport, and a view-dependent stage converting the neural scene representation into pixels. Improvements include combined windowed-attention with a rendering-informed attention sink for scalability, support for heterogeneous primitives like environment maps and participating media, and a surface-reflectance-independent neural material encoding, validated across diverse scenes with extensive ablations.

Hugging Face daily papers·Sep 3, 20:00 UTC · 12d agoAI research

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A Princeton Researcher Proposes Recurrent Looped Transformer (RLT) that Carries Decoder State across Every Token, Fixing 96 Blocks per Token with Unbounded Temporal Depth

Princeton researcher Yifan Zhang proposes Recurrent Looped Transformer, carrying full decoder state across every token for unbounded temporal depth.

Yifan Zhang's technical report defines the Recurrent Looped Transformer (RLT), pairing a causal encoder with a recurrent decoder whose final output and layerwise sliding-window attention cache carry into every subsequent token with no prompt-response boundary reset. The reference configuration ties 48 encoder and 48 decoder layers, executing 96 logical blocks per token while the state path grows to 48t blocks after t tokens at fixed per-token compute. The report details RL replay contracts that rebuild all states under current parameters and exact prefix snapshots for multi-turn serving, but explicitly reports no measured efficiency, reasoning quality, or scaling results.

MarkTechPost·Sep 13, 17:02 UTC · 3d agoAI research1

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Technical Manual for a Toolkit for Measuring Contextual Individuation in Transformer Language Models

An open methodology toolkit measures whether transformer language models contextualize fixed word forms across domains using bridge forms and layer-wise silhouette analysis.

The manual documents an open toolkit built around 'bridge forms' - identical written words recurring across two or more subject domains with a different sense in each - to test whether transformer language models individuate word occurrences by context beyond the embedding layer. It covers declarative specification of bridge forms, Wikipedia corpus acquisition, occurrence localization, layer-wise representation extraction, domain-pairwise silhouette measurement, and visualization, justifying each choice against failure modes such as sense contamination and subword-tokenization misalignment. It is a methodological and implementation reference and reports no empirical results.

arXiv cs.AI / cs.LG / cs.CL·Sep 4, 16:38 UTC · 12d agoAI research

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Type Diversity Enables Transformers to Generalise Compositionally

Researchers show lexical-versus-structural compositional generalization gaps in Transformers stem from type diversity imbalance in datasets, not architectural limits.

The paper argues that Transformers' difficulty with structural compositional generalization is an artifact of low structural type diversity in prior benchmark datasets rather than an architectural limitation. Using Grammatical Framework, the authors create linguistically diverse variants of COGS and SLOG. They find type diversity correlates with compositional generalization equally in lexical and structural test cases, contradicting previous claims that compound divergence explains task difficulty.

arXiv cs.AI / cs.LG / cs.CL·Sep 11, 17:59 UTC · 5d agoAI research

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FreeFlow: A Bias-free Hierarchical Transformer for Optical Flow Estimation

FreeFlow is a bias-free hierarchical transformer achieving state-of-the-art optical flow results on Sintel, KITTI-2015, and Spring benchmarks.

FreeFlow replaces task-specific inductive biases like correlation volumes and iterative warping with a single feed-forward encoder-decoder combining window, shifted-window, and reduced-resolution global attention. It reaches 0.68/1.48 EPE on Sintel Clean/Final, 3.23 Fl-all on KITTI-2015, and 3.192 1px on Spring. The architecture scales consistently from small to large variants and remains memory efficient at 1080p inference.

Hugging Face daily papers·Sep 9, 20:00 UTC · 6d agoAI research

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A First-Principles Evaluation of Graph-Based Network Intrusion Detection Systems

GIDS-Eval framework reveals evaluation gaps in graph-based network intrusion detection; two crafted edges fully evade three detector-dataset pairs.

Researchers introduce GIDS-Eval, a framework decomposing graph-based network intrusion detection systems into six interchangeable stages to enable controlled comparisons. Surveying nine GIDS and reimplementing five, they find two crafted edges achieve full evasion against three of eight detector-dataset pairs, snapshot windows alone cause a mean 38.3% relative swing in average precision, and none of 18 replayed detector-dataset pairs can alert as events arrive. Their encoder-free GIDS-Lite control ranks first by AP on two of four datasets at up to 575x lower runtime.

arXiv cs.CR·Sep 10, 22:38 UTC · 5d agoResearch1

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GraphProfiler: Source-Linked Sensitive Attribute Inference via Personal Knowledge Graphs

GraphProfiler links LLM attribute inferences to source posts via personal knowledge graphs, enabling targeted redaction of privacy-leaking content.

GraphProfiler represents a user's post history as a source-linked personal knowledge graph where nodes and edges trace back to originating posts, making LLM-based attribute inference auditable. It reaches 86.7% attack success rate on the eight-attribute SynthPAI benchmark and 84.6% on PANDORA, within two points of strong text-only baselines, while citing supporting evidence for over 98% of predictions. Ablation experiments show removing cited posts reduces attack success substantially more than removing random posts, supporting targeted privacy mitigation.

arXiv cs.CR·Sep 11, 05:13 UTC · 5d agoResearch1

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Learning with Covariance Matrices: Principal Component Analysis Meets Learning with Graphs

Theoretical tutorial establishes equivalence between covariance neural networks and PCA, with stability and transferability bounds and brain-age applications.

The paper reviews the theory of coVariance neural networks (VNNs), graph neural networks that operate on covariance matrices as graphs. It derives a conceptual equivalence between VNNs and PCA-based information processing, refined stability bounds under finite-sample covariance perturbations, and transferability characterizations across multiscale datasets. Demonstrated applications include brain age gap estimation for neurodegenerative conditions from neuroimaging data.

arXiv cs.AI / cs.LG / cs.CL·Sep 9, 17:28 UTC · 7d agoAI research1

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Procedural Graphs: Self-Evolving Execution Structures for LLM Agents

Researchers introduce Procedural Graphs, self-evolving (procedure, relation, procedure) structures guiding LLM agent tool use and planning.

Procedural Graphs organize procedural knowledge into (procedure, relation, procedure) triplets to guide LLM agent actions, addressing drift such as lost objectives, out-of-order tool calls, and repeated unproductive steps. At each decision step the framework localizes the active node and a guidance model translates the surrounding subgraph into step-level situational guidance. An LLM refiner edits graph topology by contrasting failed with successful trajectories, and across datasets, task types and LLMs the approach outperforms memory-based baselines and matches or surpasses hand-designed graphs.

arXiv cs.AI / cs.LG / cs.CL·Sep 8, 17:59 UTC · 8d agoAI research1

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Identifying Agentic Automation with Behavioral Telemetry

Akamai describes detecting autonomous AI browser agents like Comet using Masked Autoencoder Transformer models on sparse behavioral telemetry.

Akamai researchers present a behavioral telemetry approach for identifying agentic automation in web traffic. Masked Autoencoder Transformer models are used to detect the sparse behavioral signals produced by autonomous AI browser agents such as Comet. The work targets traffic classification and bot detection rather than a specific vulnerability, and becomes more relevant as agentic browsing adoption grows.

Akamai Blog·Aug 19, 19:00 UTC · 28d agoAI safety & security1

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Recurrent GraphNeural NetworkswithSet-BasedAggregation

Paper proves two-directional equivalence between recurrent GNNs with set-based aggregation and Boolean closure of reachability/safety properties in modal mu-calculus, checkable from weights.

The authors study recurrent graph neural networks with set-based aggregation and identify sufficient conditions, checkable directly from network weights, for compiling networks into logical formulas and formulas into networks. They establish an effective two-directional equivalence with the Boolean closure of reachability and safety properties, the fragment BΣ°1 of the modal μ-calculus, shown to be the exact expressive level of stabilization over finite vocabulary. The correspondence needs no counting logic, external halting signal, or non-effective acceptance condition, yielding a verifiable path from weights to symbolic explanations.

arXiv cs.AI / cs.LG / cs.CL·Sep 14, 17:39 UTC · 2d agoAI research

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Procedural Graphs: Self-Evolving Execution Structures for LLM Agents

Procedural Graph framework stores procedural knowledge as triplets and self-evolves via LLM refinement, beating memory-based baselines across datasets, tasks, and LLMs.

The Procedural Graph organizes procedural knowledge into (procedure, relation, procedure) triplets; at each decision step the framework localizes the agent's active node and a guidance model translates the surrounding subgraph into step-level guidance that biases the solver's next action. An LLM refiner contrasts failed with successful trajectories and edits the graph's topology and attributes, retaining rejected edits to discourage repetition. Starting from a minimal skeleton, the loop builds graphs that match or surpass hand-designed ones and can repair flawed expert priors, delivering consistent gains over memory-based baselines across multiple datasets, task types, and LLMs.

Hugging Face daily papers·Sep 7, 20:00 UTC · 8d agoAI research1

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Marigold V2: Revisiting Diffusion Transformers for Monocular Depth Estimation

Marigold V2 adapts diffusion transformers for monocular depth estimation, improving AbsRel 16-26% over the previous best on KITTI and ETH3D.

Huawei's Bayer lab revisits the Marigold approach to repurpose image generation and editing models built on the diffusion transformer (DiT) architecture into monocular depth estimators. The recipes target single-step inference from pretrained multi-step flow-matching models, with remedies including alignment to ground-truth semantic features and a two-stage fine-tuning protocol using a Sinkhorn-based loss. The resulting model produces crisper depth maps that generalize out-of-distribution and also achieves state-of-the-art results on surface normals estimation and intrinsic image decomposition.

Hugging Face daily papers·Sep 7, 20:00 UTC · 8d agoAI research

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Show HN: LLM Attention Visualization

A developer released a browser-based tool that visualizes which past tokens influence each LLM output token using aggregated, value-weighted attention scores.

A Show HN project presents a React application built on Transformers.js that renders per-token attention influence by aggregating attention weights scaled by value-vector magnitudes across all attention heads and layers. To expose internal tensors, the author instrumented the ONNX computation graph, hosted a modified model on Hugging Face, and pre-generated prompts to avoid long model downloads in the browser. Demos with a 600-million-parameter model show how verbatim copying draws heavily on source tokens and how single outputs blend information from multiple phrases.

Hacker News · AI·Sep 8, 16:59 UTC · 8d agoAI tools & infraHN 41↑ · 9 comments

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Benign Loss Landscapes Can Coexist with Worst-Case Hardness

Theory paper shows tree tensor networks contain worst-case hard targets yet benign loss landscapes, with difficulty arising from degenerate saddles.

The paper studies tree tensor networks (TTNs), which generalize deep linear networks and Tucker decompositions and embed arbitrary read-once Boolean formulas. It proves that every local minimum that is minimum-norm is global for every realizable target, so bad local minima do not distinguish typical from worst-case problems. Instead, learning difficulty arises from high-order degenerate saddle points caused by rank-deficiency, illustrated via a parity function case study, linking landscape geometry to computational hardness.

arXiv cs.AI / cs.LG / cs.CL·Sep 11, 16:57 UTC · 5d agoAI research

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GPT-6 Astra, Looped Transformers, and Hidden Reasoning

OpenAI released GPT-6 Astra, its strongest model to date, with standout 3D rendering and computer-use performance and 99.9% on ARC-AGI-3.

Sebastian Raschka reviews OpenAI's GPT-6 Astra, calling it the best model he has used, with disproportionate gains in 3D rendering, animation, and computer use through the Codex/ChatGPT harness. The model scores 99.9% on ARC-AGI-3 versus 7.8% for GPT-5.6 Sol and leads the Artificial Analysis Coding Agent Index, though gains on independent aggregate indices are more incremental. The article also explains looped transformer/recurrent depth architecture rumors, speculation that Astra hides its chain-of-thought reasoning, and recent research insights on the topic.

Hacker News · AI·Sep 9, 14:37 UTC · 7d agoModel releaseHN 84↑ · 12 comments2

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Encoded Early, Used Late: Where Transformers Begin to Act on an Inferred Partner's Expertise

Probing finds transformers represent an inferred dialogue partner's expertise in early layers long before it causally influences output.

Using ExpertCollab, a corpus of multi-turn research-planning dialogues between model-played personas at four expertise levels, researchers show that a partner's inferred expertise is most decodable in early transformer layers and decays to near chance before the network's midpoint. Counterfactual patching reveals that injecting the expertise difference at peak decodability barely changes a fixed late-layer readout, while injection past the midpoint propagates almost completely. The result bounds where readout or steering of partner-conditioned behavior must intervene, demonstrated on a single model with a synthetic corpus.

Hugging Face daily papers·Sep 6, 20:00 UTC · 9d agoAI research

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Canonical Color as a Lens into Concept Decodability in Vision Encoders and VLMs

Probing study shows vision encoders make canonical color linearly decodable from grayscale images and tie it to object identity.

Researchers use canonical color as a controlled testbed for measuring conceptual (not just visible) information in vision encoder representations. A dataset of objects with canonical colors was built, and probes on both color and grayscale images show canonical color remains decodable even when color is removed from the input, linked to predicted object identity. Extending to full VLMs, they find post-training has a surprisingly large effect on color decodability in the vision encoder.

arXiv cs.AI / cs.LG / cs.CL·Sep 8, 17:50 UTC · 8d agoAI research1

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The Pelican comparison grid for Astra is pretty interesting

Simon Willison's pelican SVG comparison shows GPT-6 Astra producing markedly better images than GPT-5.6 Sol, Terra, and Luna across reasoning levels.

Willison generated pelicans-riding-bicycles SVGs with newly accessed GPT-6 Astra at low through max reasoning levels and rendered them in a comparison grid against GPT-5.6 Sol, Terra, and Luna. Astra's outputs were markedly more coherent, while even the best GPT-5.6-Sol images remained largely abstract shapes. Astra does not support a reasoning=none setting, so all comparisons involved reasoning-enabled runs.

Simon Willison·Sep 4, 23:59 UTC · 11d agoAI research

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Not All Relations Are Equal: Relation-Balanced and Calibrated Graph Learning for Provenance-Based Intrusion Detection

RECAL improves provenance-based APT detection with relation-balanced masked graph learning and calibrated errors, reaching 99.99% F1 on DARPA E3 datasets.

RECAL is an unsupervised framework for provenance-based intrusion detection that uses relation-balanced masked graph learning to capture rare interaction patterns, addressing statistical heterogeneity where relation frequencies differ by roughly 140,000X in CADETS. It calibrates reconstruction errors against each relation's benign error distribution to produce comparable anomaly evidence and reduce false alarms. On three DARPA E3 datasets, RECAL achieves F1 scores of 99.99%, 99.93%, and 99.99%, outperforming the best baseline on each dataset, and reduces mean false positive rate by approximately 105X, 4X, and 41X versus the lowest-FPR baseline.

arXiv cs.CR·Sep 15, 00:31 UTC · 1d agoResearch

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Multi-Vector (Late Interaction) Embedding Models with Sentence Transformers

Hugging Face details building and using multi-vector late-interaction embedding models with Sentence Transformers for retrieval workloads.

Hugging Face published a guide on multi-vector, late-interaction embedding models (ColBERT-style) supported through Sentence Transformers. The post covers how practitioners can build and use these models for retrieval and RAG pipelines. It is a developer tooling and technique write-up, not a security advisory.

Hugging Face Blog·Aug 18, 00:00 UTC · 29d agoAI tools & infra1

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