Search: “longitudinal-data”

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LongAgent: History-Guided Agentic Search for Longitudinal Outcome Prediction

LongAgent autonomously searches variable sets and temporal windows to predict longitudinal medical outcomes, beating the strongest non-agent baseline on synthetic data.

The paper proposes LongAgent, an agent-based method that searches over combinations of variable sets, temporal windows and aggregation functions for outcome prediction on heterogeneous medical longitudinal data. It uses a history memory of previous searches and numerical evidence to guide exploration. On synthetic data it achieves mean RMSE 1.7376, improving over the best non-agent baseline by 0.0151 (95% CI [0.0045, 0.0260]; p=0.0273), and performs comparably to the best baseline on a real clinical dataset.

arXiv cs.AI / cs.LG / cs.CLSep 14, 16:51 UTC · 2d agoAI research

DynSHAP: Towards Explainable Dynamic Survival Analysis

DynSHAP extends SHAP explainability to dynamic survival analysis, treating time-feature pairs as Shapley players for longitudinal clinical predictions.

DynSHAP adapts marginal SHAP estimators to dynamic survival analysis by treating time-feature pairs as players in the Shapley game, handling longitudinal irregular inputs and functional survival outputs. Temporal DynSHAP learns linear feature dependencies over time and addresses them with conditional sampling. On synthetic data with ground-truth attributions it recovers temporally dependent features more accurately than marginal estimators, and it produces faithful attributions on two real-world clinical datasets across two DSA architectures.

arXiv cs.AI / cs.LG / cs.CLSep 11, 16:39 UTC · 5d agoAI research

NOAH: Learning the Full Patient Journey. A Longitudinal Multimodal Time-Aware Model for Representation and Forecasting

Researchers introduce NOAH, a generative time-aware transformer trained on 559 million MIMIC clinical events to model and forecast patient trajectories.

NOAH is a task-agnostic, time-aware generative transformer designed to represent and forecast the full multimodal patient journey across medical images, time-series signals, categorical events, and clinical text. It was trained on over 559 million clinical events from 431,000 hospital visits covering 299,000 patients in the MIMIC dataset family. The architecture combines bidirectional time integration with a variational latent space to capture continuous patient state evolution and clinical stochasticity. NOAH supports autoregressive forecasting with time control, zero-shot classification, and counterfactual intervention simulation, with evaluations on 15 ICD chapters, 29 comorbidities, and time-to-event prediction.

arXiv cs.AI / cs.LG / cs.CLSep 8, 17:56 UTC · 8d agoAI research2

NOAH: Learning the Full Patient Journey. A Longitudinal Multimodal Time-Aware Model for Representation and Forecasting

Researchers introduce NOAH, a time-aware generative transformer trained on 559 million MIMIC clinical events to forecast multimodal patient trajectories.

NOAH is a task-agnostic, time-aware generative transformer trained on over 559 million clinical events from 431,000 hospital visits by 299,000 patients across the MIMIC dataset family. It uses bidirectional time integration and a variational latent space to model the stochastic evolution of patient states, natively processing medical images, time-series signals, categorical events, and structured or unstructured clinical records. The model supports autoregressive forecasting with optional time control, zero-shot classification, and counterfactual intervention simulation, with strong probing performance across clinical outcomes, 15 ICD chapters, and 29 comorbidities.

Hugging Face daily papersSep 7, 20:00 UTC · 9d agoAI research1

Evaluating Time-Series Foundation Models and Multimodal Dietary Context for CGM Forecasting

Study finds zero-shot time-series foundation models underperform on CGM forecasting; fine-tuned Chronos-Bolt cuts RMSE up to 18.4% and dietary context adds signal.

The paper evaluates time-series foundation models for continuous glucose monitoring forecasting across eight public datasets covering Type 1 diabetes, Type 2 diabetes, and non-diabetes populations. Under a unified protocol, zero-shot foundation models did not consistently outperform baselines like Elastic Net and PatchTST, but lightweight fine-tuning did, with fine-tuned Chronos-Bolt reducing RMSE by 6.5%-18.4% in the T1D cohort and 8.6%-18.2% in the non-diabetes/T2D cohort. A residual-based fusion framework adding dietary context from CGMacros reduced overall RMSE by about 3% and postprandial RMSE by about 15% versus CGM-only baselines.

arXiv cs.AI / cs.LG / cs.CLSep 10, 17:43 UTC · 6d agoAI research

Anchoring Clinical Events in Time: UID-Preserving Multimodal Reconstruction and Source-Grounded Adjudication

UID-preserving multimodal framework plus GAVEL LLM judge improves clinical timeline reconstruction, boosting event recovery 43% over prior matching.

The paper introduces a UID-preserving framework linking each narrative clinical event to its source span through text-only estimation, structured-evidence retrieval, timestamped source-row grounding, and joint revision. GAVEL, an LLM judge, compares UID-aligned timelines against narrative and structured records. Across six open-weight models and 40 mixed-critical-care summaries, GLM 5.2 multimodal revision improved temporal agreement without reducing event recovery and performed competitively with clinician annotations, while DeepSeek V3.2 did not benefit from multimodality. The pipeline achieves 43% increased event recovery with occurrence-level provenance.

arXiv cs.AI / cs.LG / cs.CLSep 11, 17:01 UTC · 5d agoAI research1

Molecular Déjà Vu: Digit-Level Retrieval of Published Values in Frontier Language Models

Audit of 22 frontier models finds widespread verbatim retrieval of published molecular property values, with higher reasoning increasing recall of memorized numbers.

An arXiv audit tests 22 frontier LLMs across 12 molecular regression benchmarks for verbatim retrieval of published values. More than 50% of the LLMs show verbatim retrieval on five datasets, and identical experiments are flagged 89% more often at a high reasoning level than at the lowest one. Suppressing retrieval moves model prediction errors closer together in relative terms, suggesting predictive capability is not determined solely by memorized values.

arXiv cs.AI / cs.LG / cs.CLSep 4, 17:32 UTC · 12d agoAI research1

Causal Foundation Models

A paper introduces causal foundation models (CFMs): pretrained networks that estimate treatment effects on new datasets via in-context learning without fine-tuning.

Causal foundation models (CFMs) apply the foundation-model paradigm to causal inference, replacing bespoke per-problem estimator pipelines with networks pretrained once at scale. CFMs estimate causal quantities such as the average treatment effect on entirely new datasets through in-context learning, without model updates. The work serves as a practical introduction to the emerging area, covering background in causal inference and machine learning and including example code and Jupyter notebooks.

Hugging Face daily papersSep 1, 20:00 UTC · 15d agoAI research

Learning with Covariance Matrices: Principal Component Analysis Meets Learning with Graphs

Theoretical tutorial establishes equivalence between covariance neural networks and PCA, with stability and transferability bounds and brain-age applications.

The paper reviews the theory of coVariance neural networks (VNNs), graph neural networks that operate on covariance matrices as graphs. It derives a conceptual equivalence between VNNs and PCA-based information processing, refined stability bounds under finite-sample covariance perturbations, and transferability characterizations across multiscale datasets. Demonstrated applications include brain age gap estimation for neurodegenerative conditions from neuroimaging data.

arXiv cs.AI / cs.LG / cs.CLSep 9, 17:28 UTC · 7d agoAI research1

Multi-Vector (Late Interaction) Embedding Models with Sentence Transformers

Hugging Face details building and using multi-vector late-interaction embedding models with Sentence Transformers for retrieval workloads.

Hugging Face published a guide on multi-vector, late-interaction embedding models (ColBERT-style) supported through Sentence Transformers. The post covers how practitioners can build and use these models for retrieval and RAG pipelines. It is a developer tooling and technique write-up, not a security advisory.

Hugging Face BlogAug 18, 00:00 UTC · 29d agoAI tools & infra1

VidaForge: Open Research Infrastructure for Video Pretraining Data Recipes

VidaForge releases open infrastructure and VIDAFORGE-3M (3.14M clips, 6,475 hours) linking video pretraining data recipes to downstream model performance.

VidaForge is an open research infrastructure that represents a video pretraining data recipe as an executable five-stage workflow from raw videos to training datasets. The team compares data recipes with different coverage and quality during early from-scratch pretraining of Wan 2.1 and V-JEPA 2.1, finding that broader-coverage recipes achieve the highest downstream benchmark scores while loss-based evaluation favors different recipes. They also release VIDAFORGE-3M, containing 3.14 million scene-level clips totaling 6,475 hours with fine-grained annotations and curation signals for video data-recipe research.

Hugging Face daily papersSep 5, 20:00 UTC · 11d agoAI research

Technical Manual for a Toolkit for Measuring Contextual Individuation in Transformer Language Models

An open methodology toolkit measures whether transformer language models contextualize fixed word forms across domains using bridge forms and layer-wise silhouette analysis.

The manual documents an open toolkit built around 'bridge forms' - identical written words recurring across two or more subject domains with a different sense in each - to test whether transformer language models individuate word occurrences by context beyond the embedding layer. It covers declarative specification of bridge forms, Wikipedia corpus acquisition, occurrence localization, layer-wise representation extraction, domain-pairwise silhouette measurement, and visualization, justifying each choice against failure modes such as sense contamination and subword-tokenization misalignment. It is a methodological and implementation reference and reports no empirical results.

arXiv cs.AI / cs.LG / cs.CLSep 4, 16:38 UTC · 12d agoAI research

Show HN: LLM Attention Visualization

A developer released a browser-based tool that visualizes which past tokens influence each LLM output token using aggregated, value-weighted attention scores.

A Show HN project presents a React application built on Transformers.js that renders per-token attention influence by aggregating attention weights scaled by value-vector magnitudes across all attention heads and layers. To expose internal tensors, the author instrumented the ONNX computation graph, hosted a modified model on Hugging Face, and pre-generated prompts to avoid long model downloads in the browser. Demos with a 600-million-parameter model show how verbatim copying draws heavily on source tokens and how single outputs blend information from multiple phrases.

Hacker News · AISep 8, 16:59 UTC · 8d agoAI tools & infra HN 41↑ · 9 comments

What We Learned by Reproducing 2,200 papers from ICML

Hugging Face shares lessons from openly reproducing 2,200 ICML 2026 papers, examining reproducibility and open implementation practices in machine learning research.

Hugging Face published a retrospective on its open reproduction effort covering 2,200 papers from ICML 2026. The post summarizes lessons learned about reproducibility and building open, community-driven implementations of published machine learning research. No detailed article text was available in the feed.

Hugging Face BlogAug 13, 00:00 UTC · Aug 13, 2026AI research

From Reweighting to Rewriting: Unlocking the Intervention Effects of Influential Samples in Training Data Attribution

Study shows rewriting responses of influence-selected training examples shifts LLM behavior more strongly than reweighting the same samples.

The paper examines training data attribution, arguing that influence functions identify high-leverage examples whose value goes unrealized under conventional weight-based reweighting interventions. It introduces influence-guided response rewriting, which replaces the responses of influence-selected examples with behavior-aligned or behavior-opposed supervision while keeping instructions fixed, tested across four open-weight LLMs using epistemic abstention as the primary testbed. Rewriting produces stronger, more persistent, and bidirectional behavioral shifts, including on safety refusal, while reweighting the same examples yields weak, inconsistent effects. The results motivate intervention-aware evaluation of TDA methods.

Hugging Face daily papersSep 1, 20:00 UTC · 15d agoAI research

Reference-Based Bias Detection in LLMs via Relative Representations of Hidden States

Researchers propose auditing LLM bias via relative hidden-state representations, detecting bias increases with 3-50x less compute than output-level benchmarks.

The paper introduces a reference-based bias auditing method that compares hidden-state representations across model variants, such as before and after fine-tuning, by encoding sentences relative to a fixed anchor set. The resulting Representational Bias Shift (Delta-B) correlates with output-level bias change in 15 of 18 tested settings, reaching |r| = 0.84 under full fine-tuning across WildGuardMix, DecodingTrust, and ToxiGen benchmarks. Thresholding Delta-B detects checkpoints whose bias increased with ROC AUC between 0.65 and 0.99 and beats a SEAT-based baseline, while auditing a model in about three minutes with 3-50x less compute.

Hugging Face daily papersSep 8, 20:00 UTC · 8d agoAI research

Studying Image Tokenizers as Visual Languages in Unified Multimodal Models

A controlled autoregressive testbed shows validation losses must be analyzed per task, and image tokenizer choice affects joint multimodal text modeling.

Researchers built a pure-autoregressive testbed to study image tokenizers as the 'visual language' of unified multimodal models, tracking task-specific validation losses during multimodal continual pretraining across text, image, text-to-image (T2I), and image-to-text (I2T) prediction. They found that losses exhibit distinct scaling behavior per task and rank tokenizers differently, and that I2T loss over a shared text vocabulary gives a more consistent loss–performance signal than T2I loss. Better reconstruction does not necessarily yield lower task-specific losses or stronger downstream performance, and tokenizer choice can affect text modeling under joint optimization. Case studies examine the discriminator, semantic supervision, and vocabulary size design axes.

Hugging Face daily papersSep 7, 20:00 UTC · 9d agoAI research1

Studying Image Tokenizers as Visual Languages in Unified Multimodal Models

A controlled pure-autoregressive testbed shows task-specific validation losses rank image tokenizers differently, with I2T loss the most consistent signal.

Researchers built a controlled pure-autoregressive testbed and tracked task-specific validation losses during multimodal continual pretraining across text, image, text-to-image (T2I), and image-to-text (I2T) prediction. They find losses should be analyzed per task because they exhibit distinct scaling behavior and rank tokenizers differently, and that the loss-performance relationship depends on the predicted token space. I2T loss, computed over a shared text vocabulary, correlates consistently with both generation and visual understanding performance after supervised finetuning. Case studies revisit the discriminator, semantic supervision, and vocabulary size as tokenizer design axes.

arXiv cs.AI / cs.LG / cs.CLSep 8, 17:57 UTC · 8d agoAI research1

Transfer Learning for Evolving Domains

TrED formalizes transfer learning for domains whose data availability evolves over time, arguing classical settings are regimes along one trajectory, and remains unsolved.

The paper introduces Transfer Learning for Evolving Domains (TrED), formalizing transfer learning as a trajectory problem where target data and labels are progressively collected. TrED is specified by a data availability process fixed by the environment, a freely chosen learning protocol, and an evaluation criterion scoring the whole trajectory of models. Classical settings like domain generalization, domain adaptation, and multi-domain learning are recovered as regimes within this framework. The authors survey the literature and find most methods are tailored to a single regime, leaving TrED a well-posed open problem.

arXiv cs.AI / cs.LG / cs.CLSep 11, 16:37 UTC · 5d agoAI research

Training and Finetuning Multi-Vector Embedding Models with Sentence Transformers

Hugging Face published a tutorial on training and finetuning multi-vector embedding models using the Sentence Transformers library.

Hugging Face's blog walks through training and finetuning multi-vector embedding models with Sentence Transformers. Multi-vector approaches store multiple vectors per document to support late-interaction retrieval. The post is a practical guide for developers building retrieval pipelines with the library.

Hugging Face BlogAug 26, 00:00 UTC · 21d agoAI tools & infra1

LimiX-2: A Contextual Mechanism Network Towards General Structured-Data Intelligence

LimiX-2 scales Contextual Mechanism Networks pretrained via context-conditional masked modeling, beating tabular foundation models on TabArena, TALENT, and BCCO benchmarks.

LimiX-2 is a new tabular model in the LimiX family, developed through model and data scaling guided by previously established scaling laws under the Contextual Mechanism Networks (CMNs) paradigm. It is pretrained with Context-Conditional Masked Modeling (CCMM) on synthetic datasets generated by structural causal models spanning diverse graph structures, functional mechanisms, and observation processes. It outperforms dataset-specific models and tabular foundation models on TabArena, TALENT, and BCCO, and its feature attention encodes direct causal relationships, enabling accurate causal skeleton recovery.

arXiv cs.AI / cs.LG / cs.CLSep 15, 17:30 UTC · 1d agoAI research1

18 ways to check whether data can be trusted for AI

ETSI published TR 104 180 defining 18 data quality metrics, including fairness and privacy, to assess whether datasets are fit for AI.

ETSI's technical report TR 104 180 defines 18 metrics across four groups - intrinsic quality, usability and lineage, fairness, and privacy - each with calculation formulas, plus an open-source tool that scores datasets. Testing on an aircraft engine sensor dataset and a US census dataset revealed a roughly threefold gender gap in high earners (about 31% of men versus 11% of women) and two privacy failures: re-identification via age, race, sex, and country, and sensitive fields stored in plaintext. The working group included Sejong University, EGM, TTA, Daejeon University, and CNIT.

Help Net SecuritySep 7, 00:00 UTC · 9d agoAI policy

CausalArena: Benchmarking Causal Discovery in the Foundation Model Era

Researchers introduce CausalArena, a unified benchmark revealing that causal discovery rankings shift substantially across structural causal model families and protocols.

The paper presents CausalArena, a unified and evolvable benchmark for causal discovery combining synthetic structural causal models, semantically grounded operational SCMs, formula-grounded scientific SCMs, and public real-world datasets. Experiments across classical, neural, and pretrained causal discovery foundation models show large ranking shifts between benchmark regimes. The authors identify pretraining-evaluation overlap and benchmark diversity as central evaluation challenges.

arXiv cs.AI / cs.LG / cs.CLSep 10, 17:53 UTC · 6d agoAI research

WearableQA: A Benchmark for Health Reasoning over Real-World Wearable Data

WearableQA benchmark introduces 4,084 questions over real longitudinal wearable data, showing 14 LLMs score 19.6-72.9% on health reasoning, far from solved.

WearableQA is a benchmark of 4,084 10-option multiple-choice questions built from wearable time series, blood biomarkers, and demographics of 200 real users with up to 500 days of daily measurements. It defines 16 question types along two axes: data versus health reasoning, and single- versus cross-signal reasoning, using a dual-grounding framework combining literature and population-validated patterns. Evaluations of 14 proprietary and open-source LLMs show accuracy ranging from 19.6% to 72.9% against a 10% chance baseline, with most models below 60%.

Hugging Face daily papersSep 3, 20:00 UTC · 13d agoAI research

RelateAnything: Real-Time Open-Vocabulary Relation Prediction From Any Inputs

RelateAnything is a 53M-parameter open-vocabulary relation prediction model running at 20 ms/frame, with 2.3-3.5x higher mean recall than comparable open-vocabulary methods.

RelateAnything predicts scored relations between image regions using any predicate vocabulary supplied at inference as text embeddings, with object labels never required as input, so region sources can change without retraining. Training covers 19,103 predicates using positive-unlabeled supervision; the authors release RA-4M (474k images, 4.3M geometrically verified relations over 10,102 free-text predicates) and the OV-SGG-Bench evaluation suite. The 53M-parameter model runs at 20 ms/frame and achieves 2.3-3.5x the mean recall of the strongest comparable open-vocabulary method across cross-dataset and zero-shot benchmarks. Model, corpus, and benchmark are public.

Hugging Face daily papersSep 10, 20:00 UTC · 6d agoAI research

TempCloze: Can Video-LLMs Identify the Missing Middle?

TempCloze benchmark tests Video-LLMs' temporal reasoning with 1,521 videos, finding temporal alignment is the primary failure mode across 31 models.

TempCloze is a video cloze benchmark in which models must identify the true missing middle clip given the beginning and ending clips, using 1,521 carefully filtered videos from seven sources, mostly long-take and egocentric footage. Distractors are constructed along three dimensions: Semantic, Alignment and Progression, with shared scenes and objects to reduce appearance cues. Evaluation of 10 proprietary and 21 open-source Video-LLMs found Alignment is the primary bottleneck, with models often recognizing plausible semantics and local event progression but struggling with temporal alignment.

Hugging Face daily papersAug 31, 20:00 UTC · 16d agoAI research

WearableQA: A Benchmark for Health Reasoning over Real-World Wearable Data

WearableQA benchmark tests LLM health reasoning over longitudinal wearable data; the best of 14 evaluated LLMs reaches 72.9% accuracy.

WearableQA comprises 4,084 ten-option multiple-choice questions built from wearable time series, blood biomarkers, and demographics of 200 real users with up to 500 days of daily measurements. It defines 16 question types along two axes: data versus health reasoning, and single- versus cross-signal reasoning. Evaluation of 14 proprietary and open-source LLMs shows performance from 19.6% to 72.9% against a 10% chance baseline, with most models below 60%.

arXiv cs.AI / cs.LG / cs.CLSep 4, 17:52 UTC · 12d agoAI research

State of Open Models: Summer 2026 Observations

Hugging Face publishes observations on the state of the open-weights model ecosystem as of summer 2026.

A Hugging Face blog post titled 'State of Open Models: Summer 2026 Observations' surveys developments across the open-weights model ecosystem. No article text was available, so specific model releases, benchmarks, and findings are not detailed here.

Hugging Face BlogAug 14, 00:00 UTC · Aug 14, 2026AI industry

Diffusion Models and Concept Formation

Paper argues diffusion models implicitly form Cobweb-like concept hierarchies, with a basic level emerging at intermediate noise levels.

The authors draw a formal correspondence between diffusion models and Cobweb, a classic incremental concept-hierarchy learner, noting both are hierarchical Bayesian density models with Gaussian prototypes. Modes of the diffusion model's noisy marginals form a hierarchy whose basic level sits at intermediate noise, where class identity commits. The correspondence is tested on MNIST and Fashion-MNIST via mode-finding. Diffusion is reframed as a cognitive model of concept formation.

arXiv cs.AI / cs.LG / cs.CLSep 11, 16:43 UTC · 5d agoAI research

Bag of Tricks or Bag of Myths? Reducing Modeling Complexity with Task Knowledge in Explainable Suicide Risk Assessment

Researchers audit 31 NLP techniques for clinician-annotated suicide risk prediction, finding only 5 of 31 comparisons yield reliable gains.

A study of 1,635 clinician-annotated social media posts ran roughly 300 controlled experiments across 7 methodological families, auditing techniques such as model scaling, synthetic data, ensembling, and threshold tuning under severe class imbalance. The proposed system reformulates risk factor prediction as entailment between posts and codebook definitions, using architecturally diverse ensembles with class-balanced training and deployment-consistent calibration. It scores 0.8203 for risk, 0.7953 for evidence, and 0.7045 macro-F1 for factors, ranking third among 53 teams.

arXiv cs.AI / cs.LG / cs.CLSep 7, 17:14 UTC · 9d agoAI research